Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ciccaronei |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1202362 bp
Thymine Count
1203783 bp
Guanine Count
1674567 bp
Cytosine Count
1672759 bp
Genome Length
5757421 bp
Protein-coding Genes
5384 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase b-type cytochrome subunit | ALO78_01942 | Not Available | Negative | 892878 - 893423 | 20612.3 |
| putative dna-binding response regulator qseb | ALO78_01943 | Q9HV32 | Positive | 893677 - 894339 | 24703.1 |
| sensor histidine kinase qsec | ALO78_101024 | Q8X739 | Positive | 894156 - 895709 | 57587.3 |
| l-pipecolate oxidase | ALO78_01944 | P44732 | Negative | 895722 - 897008 | 45703.3 |
| delta 1-piperideine-6-carboxylate dehydrogenase | ALO78_04566 | P46562 | Negative | 897051 - 898706 | 59958.6 |
| 5-aminovalerate aminotransferase / 4-aminobutyrate aminotransferase | ALO78_01946 | Q9I6M4 | Positive | 898795 - 899811 | 36173.2 |
| 5-aminovalerate aminotransferase / 4-aminobutyrate aminotransferase | ALO78_01947 | Not Available | Positive | 899775 - 900038 | 9280.57 |
| putative cytoplasmic protein | ALO78_01948 | P76097 | Positive | 900062 - 901441 | 51024.3 |
| methyl-accepting chemotaxis protein | ALO78_03888 | Q88E10 | Positive | 901599 - 903416 | 65523.6 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO78_03889 | Not Available | Negative | 903480 - 904244 | 26598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
