Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ciccaronei |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1202362 bp
Thymine Count
1203783 bp
Guanine Count
1674567 bp
Cytosine Count
1672759 bp
Genome Length
5757421 bp
Protein-coding Genes
5384 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc-like domain-containing protein | ALO78_01213 | Q7U2S5 | Positive | 845275 - 845730 | 16767.6 |
| morn repeat-containing protein | ALO78_100165 | Not Available | Positive | 845850 - 847598 | 62964.2 |
| nucleoside-diphosphate-sugar epimerase | ALO78_01214 | P45469 | Positive | 847627 - 848268 | 23359.4 |
| lipoprotein | ALO78_01215 | Not Available | Negative | 848412 - 848696 | 9344.56 |
| putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | ALO78_01216 | Q9HX08 | Negative | 848689 - 849318 | 22674.6 |
| udp-n-acetylmuramate--alanine ligase | ALO78_01217 | P37773 | Negative | 849315 - 850670 | 48562.1 |
| hypothetical protein | ALO78_100937 | Not Available | Positive | 850659 - 850787 | 4808.75 |
| type iii effector hopd1 | ALO78_04451 | Not Available | Positive | 850875 - 851356 | 17002.6 |
| snf2-related:helicase | ALO78_04720 | Not Available | Positive | 851357 - 851596 | 8933.71 |
| uncharacterized protein | ALO78_02461 | Not Available | Positive | 851825 - 852403 | 20762.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
