Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ciccaronei |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1202362 bp
Thymine Count
1203783 bp
Guanine Count
1674567 bp
Cytosine Count
1672759 bp
Genome Length
5757421 bp
Protein-coding Genes
5384 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crfx protein | ALO78_03411 | Not Available | Positive | 5645824 - 5646072 | 8812.41 |
| cmpx | ALO78_03412 | Not Available | Positive | 5646075 - 5646899 | 28975.6 |
| rna polymerase sigma factor sigx | ALO78_03413 | Not Available | Positive | 5646982 - 5647572 | 23333.1 |
| hypothetical protein | ALO78_100766 | Not Available | Negative | 5647537 - 5647659 | 4430.4 |
| oprf | ALO78_03414 | Not Available | Positive | 5647678 - 5648712 | 36633.1 |
| uroporphyrinogen-iii methyltransferase | ALO78_03415 | P37725 | Negative | 5648800 - 5649561 | 26764.6 |
| assimilatory nitrate reductase large subunit | ALO78_05019 | P39458 | Negative | 5649572 - 5652298 | 99564.9 |
| nitrite reductase large subunit | ALO78_03417 | P42435 | Negative | 5652289 - 5653518 | 44313.8 |
| hypothetical protein | ALO78_100818 | Not Available | Positive | 5653662 - 5653802 | 5121.37 |
| serine/threonine protein kinase | ALO78_05021 | Q8R9T6 | Negative | 5653796 - 5655457 | 61523.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
