Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ciccaronei |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1202362 bp
Thymine Count
1203783 bp
Guanine Count
1674567 bp
Cytosine Count
1672759 bp
Genome Length
5757421 bp
Protein-coding Genes
5384 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytochrome bd2, subunit i / cyanide insensitive terminal oxidase, subunit i | ALO78_01954 | P26459 | Negative | 5131398 - 5132837 | 53499.7 |
| aldehyde oxidase and xanthine dehydrogenase family protein | ALO78_04574 | P77489 | Negative | 5133244 - 5135445 | 79266.2 |
| iron-sulfur cluster-binding protein | ALO78_01956 | P77165 | Negative | 5136428 - 5136958 | 18762.4 |
| xanthine/uracil/thiamine/ascorbate permease family protein | ALO78_01957 | P31466 | Positive | 5137223 - 5138518 | 44991.6 |
| trna/tmrna -methyltransferase | ALO78_01958 | Q48DT0 | Positive | 5138515 - 5139600 | 41141.9 |
| outer membrane porin | ALO78_00829 | Q88FY7 | Positive | 5140025 - 5141056 | 37679.0 |
| putative hydroxycinnamic acid degradation regulator | ALO78_00830 | Not Available | Negative | 5141242 - 5141730 | 17819.6 |
| 4-hydroxycinnamoyl coa hydratase/lyase | ALO78_00831 | O69762 | Positive | 5141942 - 5142772 | 31121.6 |
| vanillin dehydrogenase | ALO78_00832 | O69763 | Positive | 5142857 - 5144311 | 50560.8 |
| feruloyl-coa synthase | ALO78_00833 | E5XP76 | Positive | 5144464 - 5146350 | 68958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
