Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ciccaronei |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1202362 bp
Thymine Count
1203783 bp
Guanine Count
1674567 bp
Cytosine Count
1672759 bp
Genome Length
5757421 bp
Protein-coding Genes
5384 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO78_01073 | Not Available | Negative | 4992891 - 4993400 | 18758.7 |
| hypothetical protein | ALO78_01074 | Q48IK9 | Positive | 4993555 - 4994217 | 24471.3 |
| shikimate 5-dehydrogenase | ALO78_01075 | P44774 | Negative | 4994258 - 4995073 | 29034.8 |
| uncharacterized protein | ALO78_01076 | Not Available | Positive | 4995817 - 4995999 | 6504.03 |
| uncharacterized protein | ALO78_01077 | Not Available | Negative | 4996096 - 4996719 | 23495.7 |
| d-alanyl-d-alanine endopeptidase | ALO78_01078 | P0AFI5 | Positive | 4996918 - 4997859 | 34316.0 |
| 2-ketoglutaric semialdehyde dehydrogenase | ALO78_01079 | Q1JUP4 | Negative | 4997931 - 4999373 | 51261.6 |
| membrane protein | ALO78_100510 | Not Available | Negative | 4999405 - 4999818 | 15675.0 |
| oxidoreductase, short chain dehydrogenase/reductase family | ALO78_04322 | O07575 | Negative | 5000033 - 5000995 | 34617.5 |
| glutathione-independent formaldehyde dehydrogenase | ALO78_04323 | Q9HTE3 | Negative | 5000999 - 5002138 | 40645.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
