Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ciccaronei |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1202362 bp
Thymine Count
1203783 bp
Guanine Count
1674567 bp
Cytosine Count
1672759 bp
Genome Length
5757421 bp
Protein-coding Genes
5384 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | ALO78_01032 | Not Available | Positive | 367406 - 367951 | 20436.1 |
| putative o-antigen abc transporter, atp-binding protein | ALO78_100406 | Q07698 | Positive | 368768 - 370132 | 50155.5 |
| glycosyl transferase, group 2 family protein | ALO78_100778 | Not Available | Positive | 370107 - 374756 | 173290.0 |
| putative membrane protein | ALO78_01033 | Not Available | Positive | 374820 - 376697 | 68148.6 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | ALO78_100420 | P15263 | Positive | 376667 - 377815 | 41176.3 |
| polymyxin resistance protein arnc, glycosyl transferase | ALO78_01034 | Q55487 | Positive | 377818 - 378762 | 35585.5 |
| bifunctional acetyl transferase/isomerase | ALO78_01035 | Q6T1W7 | Positive | 378749 - 379699 | 34503.9 |
| membrane protein | ALO78_100951 | Not Available | Positive | 379707 - 380108 | 15010.9 |
| lipoprotein | ALO78_101729 | Not Available | Positive | 380320 - 380800 | 17514.0 |
| hypothetical protein | ALO78_200211 | Not Available | Negative | 380908 - 381723 | 30379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
