Idiomarina ramblicola str. R22

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina ramblicola strain R22 is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 32.0°C. This species is characterized by its non-spore-forming nature, which indicates a reliance on favorable environmental conditions for survival and reproduction rather than the ability to withstand extreme stress through sporulation. The Gram-negative cell wall structure of Idiomarina ramblicola str. R22 suggests a complex outer membrane that may confer a variety of adaptive advantages, such as resistance to certain antibiotics and the capacity for selective transport of nutrients. Its rod shape is a common morphological trait among many bacteria, facilitating motility and nutrient uptake in diverse aquatic environments. The specific growth temperature of 32.0°C aligns with the organism's potential habitat in moderately warm aquatic systems, which may influence its metabolic pathways and ecological interactions. The aerobic requirement indicates that this bacterium utilizes oxygen for its metabolic processes, potentially impacting the local biogeochemical cycles, particularly in marine environments where oxygen availability varies. Overall, Idiomarina ramblicola str. R22 exemplifies the adaptations of certain marine bacteria to specific thermal and oxygen conditions, highlighting the intricate relationships between microbial life and their environmental niches in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina ramblicola
StrainR22

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Idiomarina ramblicola str. R22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatRambla Salada
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina ramblicola strain R22 contig15, whole genome shotgun

Gene Summary

Adenine Count

720849 bp

Thymine Count

718670 bp

Guanine Count

620650 bp

Cytosine Count

652191 bp

Genome Length

2712360 bp

Protein-coding Genes

2512 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione synthaseCWI78_08870Not AvailableNegative1863042 - 186398635090.3
16s rrna (uracil(1498)-n(3))-methyltransferaseCWI78_08875Not AvailableNegative1863997 - 186472826924.1
methionine adenosyltransferaseCWI78_08880Not AvailablePositive1864844 - 186598941768.5
transketolaseCWI78_08885Not AvailablePositive1866081 - 186808172732.5
erythrose-4-phosphate dehydrogenaseCWI78_08890Not AvailablePositive1868082 - 186910737848.8
phosphoglycerate kinaseCWI78_08895Not AvailablePositive1869126 - 187030741396.6
fructose-bisphosphate aldolase class iiCWI78_08900Not AvailablePositive1870338 - 187140238458.7
duf481 domain-containing proteinCWI78_08905Not AvailablePositive1871441 - 187222629170.1
methyl-accepting chemotaxis proteinCWI78_08910Not AvailablePositive1872335 - 187425771606.2
tigr00153 family proteinCWI78_08915Not AvailablePositive1874349 - 187502925673.0

Displaying genes 1771 – 1780 of 2565 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.