Idiomarina ramblicola str. R22

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina ramblicola strain R22 is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 32.0°C. This species is characterized by its non-spore-forming nature, which indicates a reliance on favorable environmental conditions for survival and reproduction rather than the ability to withstand extreme stress through sporulation. The Gram-negative cell wall structure of Idiomarina ramblicola str. R22 suggests a complex outer membrane that may confer a variety of adaptive advantages, such as resistance to certain antibiotics and the capacity for selective transport of nutrients. Its rod shape is a common morphological trait among many bacteria, facilitating motility and nutrient uptake in diverse aquatic environments. The specific growth temperature of 32.0°C aligns with the organism's potential habitat in moderately warm aquatic systems, which may influence its metabolic pathways and ecological interactions. The aerobic requirement indicates that this bacterium utilizes oxygen for its metabolic processes, potentially impacting the local biogeochemical cycles, particularly in marine environments where oxygen availability varies. Overall, Idiomarina ramblicola str. R22 exemplifies the adaptations of certain marine bacteria to specific thermal and oxygen conditions, highlighting the intricate relationships between microbial life and their environmental niches in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina ramblicola
StrainR22

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Idiomarina ramblicola str. R22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatRambla Salada
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina ramblicola strain R22 contig15, whole genome shotgun

Gene Summary

Adenine Count

720849 bp

Thymine Count

718670 bp

Guanine Count

620650 bp

Cytosine Count

652191 bp

Genome Length

2712360 bp

Protein-coding Genes

2512 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-8-phosphooctulonate synthaseCWI78_08120Not AvailableNegative1702418 - 170326330834.5
hypothetical proteinCWI78_08125Not AvailableNegative1703276 - 170454744713.6
invasion proteinCWI78_08130Not AvailableNegative1704563 - 170493713807.8
response regulatorCWI78_08135Not AvailableNegative1704959 - 170643154557.4
peptide chain release factor n(5)-glutamine methyltransferaseCWI78_08140Not AvailableNegative1706434 - 170727931529.5
peptide chain release factor 1CWI78_08145Not AvailableNegative1707276 - 170836741008.7
glutamyl-trna reductaseCWI78_08150Not AvailableNegative1708374 - 170964546760.7
outer membrane lipoprotein lolbCWI78_08155Not AvailablePositive1709778 - 171041324485.0
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseCWI78_08160Not AvailablePositive1710395 - 171125531029.0
ribose-phosphate pyrophosphokinaseCWI78_08165Not AvailablePositive1711280 - 171221833842.7

Displaying genes 1621 – 1630 of 2565 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.