Idiomarina ramblicola str. R22

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina ramblicola strain R22 is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 32.0°C. This species is characterized by its non-spore-forming nature, which indicates a reliance on favorable environmental conditions for survival and reproduction rather than the ability to withstand extreme stress through sporulation. The Gram-negative cell wall structure of Idiomarina ramblicola str. R22 suggests a complex outer membrane that may confer a variety of adaptive advantages, such as resistance to certain antibiotics and the capacity for selective transport of nutrients. Its rod shape is a common morphological trait among many bacteria, facilitating motility and nutrient uptake in diverse aquatic environments. The specific growth temperature of 32.0°C aligns with the organism's potential habitat in moderately warm aquatic systems, which may influence its metabolic pathways and ecological interactions. The aerobic requirement indicates that this bacterium utilizes oxygen for its metabolic processes, potentially impacting the local biogeochemical cycles, particularly in marine environments where oxygen availability varies. Overall, Idiomarina ramblicola str. R22 exemplifies the adaptations of certain marine bacteria to specific thermal and oxygen conditions, highlighting the intricate relationships between microbial life and their environmental niches in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina ramblicola
StrainR22

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Idiomarina ramblicola str. R22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatRambla Salada
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina ramblicola strain R22 contig15, whole genome shotgun

Gene Summary

Adenine Count

720849 bp

Thymine Count

718670 bp

Guanine Count

620650 bp

Cytosine Count

652191 bp

Genome Length

2712360 bp

Protein-coding Genes

2512 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenaseCWI78_07870Not AvailableNegative1654262 - 165541941971.3
methylmalonate-semialdehyde dehydrogenase (coa acylating)CWI78_07875Not AvailableNegative1655432 - 165693154609.1
eama family transporterCWI78_07880Not AvailablePositive1657000 - 165787832146.5
acetyl-coa c-acyltransferaseCWI78_07885Not AvailableNegative1657889 - 165907041046.7
merr family transcriptional regulatorCWI78_07890Not AvailablePositive1659149 - 165956816021.1
acyl-coa dehydrogenaseCWI78_07895Not AvailablePositive1659565 - 166073442584.8
methylcrotonoyl-coa carboxylaseCWI78_07900Not AvailablePositive1660750 - 166235758205.7
gamma-carboxygeranoyl-coa hydrataseCWI78_07905Not AvailablePositive1662374 - 166315928619.4
3-methylcrotonyl-coa carboxylaseCWI78_07910Not AvailablePositive1663174 - 166514472584.7
hydroxymethylglutaryl-coa lyaseCWI78_07915Not AvailablePositive1665147 - 166605231406.1

Displaying genes 1571 – 1580 of 2565 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.