Marinobacter flavimaris str. KCTC 12185

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter flavimaris str. KCTC 12185 is a Gram-negative, non-spore-forming rod-shaped bacterium that thrives under anaerobic conditions, with an optimal growth temperature of 37.0°C. This organism is part of the Marinobacter genus, which is known for its diverse metabolic capabilities, particularly in marine environments. The Gram-negative nature of M. flavimaris suggests that it possesses a characteristic outer membrane, which may contribute to its environmental adaptability and could influence its interactions with other microorganisms in its habitat. The rod shape of this bacterium is typical for many members of the Marinobacter genus, facilitating motility and colonization in various substrates, particularly in aquatic environments. Given its anaerobic requirement, M. flavimaris str. KCTC 12185 likely plays a role in the degradation of organic matter in oxygen-limited environments, such as sediments or deep-sea habitats. This trait may contribute to biogeochemical cycles by facilitating the breakdown of complex organic compounds, thereby influencing nutrient availability in its ecosystem. The strain's optimal growth temperature of 37.0°C suggests it could be well-suited for environments that experience warm conditions, possibly including shallow marine ecosystems or coastal regions where temperature fluctuations are minimal. Further studies on M. flavimaris str. KCTC 12185 could elucidate its specific functions and interactions within microbial communities in these anaerobic niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter flavimaris
StrainKCTC 12185

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Marinobacter flavimaris str. KCTC 12185
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter flavimaris strain KCTC 12185 42, whole genome shotgun

Gene Summary

Adenine Count

957983 bp

Thymine Count

955841 bp

Guanine Count

1282642 bp

Cytosine Count

1265670 bp

Genome Length

4462136 bp

Protein-coding Genes

4010 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDXI23_18040Not AvailablePositive3910299 - 391082319141.8
glucose-6-phosphate isomeraseDXI23_18045Not AvailableNegative3910806 - 391246760991.5
pantoate--beta-alanine ligaseDXI23_18050Not AvailableNegative3912490 - 391333830695.6
3-methyl-2-oxobutanoate hydroxymethyltransferaseDXI23_18055Not AvailableNegative3913335 - 391412928300.3
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDXI23_18060Not AvailableNegative3914189 - 391468618498.3
polynucleotide adenylyltransferase pcnbDXI23_18065Not AvailableNegative3914686 - 391605052244.5
hypothetical proteinDXI23_18070Not AvailableNegative3916043 - 39162527849.49
sigma-54-dependent fis family transcriptional regulatorDXI23_18075Not AvailableNegative3916722 - 391812551807.8
pas domain s-box proteinDXI23_18080Not AvailableNegative3918133 - 3921096107317.0
trna glutamyl-q(34) synthetase gluqrsDXI23_18085Not AvailableNegative3921313 - 392218532643.5

Displaying genes 3561 – 3570 of 4067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.