Marinobacter flavimaris str. KCTC 12185

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter flavimaris str. KCTC 12185 is a Gram-negative, non-spore-forming rod-shaped bacterium that thrives under anaerobic conditions, with an optimal growth temperature of 37.0°C. This organism is part of the Marinobacter genus, which is known for its diverse metabolic capabilities, particularly in marine environments. The Gram-negative nature of M. flavimaris suggests that it possesses a characteristic outer membrane, which may contribute to its environmental adaptability and could influence its interactions with other microorganisms in its habitat. The rod shape of this bacterium is typical for many members of the Marinobacter genus, facilitating motility and colonization in various substrates, particularly in aquatic environments. Given its anaerobic requirement, M. flavimaris str. KCTC 12185 likely plays a role in the degradation of organic matter in oxygen-limited environments, such as sediments or deep-sea habitats. This trait may contribute to biogeochemical cycles by facilitating the breakdown of complex organic compounds, thereby influencing nutrient availability in its ecosystem. The strain's optimal growth temperature of 37.0°C suggests it could be well-suited for environments that experience warm conditions, possibly including shallow marine ecosystems or coastal regions where temperature fluctuations are minimal. Further studies on M. flavimaris str. KCTC 12185 could elucidate its specific functions and interactions within microbial communities in these anaerobic niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter flavimaris
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter flavimaris str. KCTC 12185

Accession NumberQRDH00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4010 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phenylacetic acid degradation bifunctional protein paazDXI23_00100Not Available-16796 - 1884173726.1
phenylacetate-coa oxygenase/reductase subunit paakDXI23_00105Not Available-18929 - 2000840414.7
phenylacetate-coa oxygenase subunit paajDXI23_00110Not Available-20022 - 2059120704.5
phenylacetate-coa oxygenase subunit paaiDXI23_00115Not Available-20575 - 2133929134.4
1,2-phenylacetyl-coa epoxidase subunit bDXI23_00120Not Available-21352 - 2163310649.4
1,2-phenylacetyl-coa epoxidase subunit aDXI23_00125Not Available-21651 - 2264338155.3
phenylacetate--coa ligaseDXI23_00130Not Available-22971 - 2428148740.5
3-oxoadipyl-coa thiolaseDXI23_00135Not Available-24341 - 2557043149.7
hydroxyphenylacetyl-coa thioesterase paaiDXI23_00140Not Available-25585 - 2603115959.8
3-hydroxyacyl-coa dehydrogenase paacDXI23_00145Not Available-26028 - 2754853888.5

Displaying genes 21 – 30 of 4067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites