Marinobacter flavimaris str. KCTC 12185

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter flavimaris str. KCTC 12185 is a Gram-negative, non-spore-forming rod-shaped bacterium that thrives under anaerobic conditions, with an optimal growth temperature of 37.0°C. This organism is part of the Marinobacter genus, which is known for its diverse metabolic capabilities, particularly in marine environments. The Gram-negative nature of M. flavimaris suggests that it possesses a characteristic outer membrane, which may contribute to its environmental adaptability and could influence its interactions with other microorganisms in its habitat. The rod shape of this bacterium is typical for many members of the Marinobacter genus, facilitating motility and colonization in various substrates, particularly in aquatic environments. Given its anaerobic requirement, M. flavimaris str. KCTC 12185 likely plays a role in the degradation of organic matter in oxygen-limited environments, such as sediments or deep-sea habitats. This trait may contribute to biogeochemical cycles by facilitating the breakdown of complex organic compounds, thereby influencing nutrient availability in its ecosystem. The strain's optimal growth temperature of 37.0°C suggests it could be well-suited for environments that experience warm conditions, possibly including shallow marine ecosystems or coastal regions where temperature fluctuations are minimal. Further studies on M. flavimaris str. KCTC 12185 could elucidate its specific functions and interactions within microbial communities in these anaerobic niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter flavimaris
StrainKCTC 12185

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Marinobacter flavimaris str. KCTC 12185
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter flavimaris strain KCTC 12185 42, whole genome shotgun

Gene Summary

Adenine Count

957983 bp

Thymine Count

955841 bp

Guanine Count

1282642 bp

Cytosine Count

1265670 bp

Genome Length

4462136 bp

Protein-coding Genes

4010 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe-s cluster assembly transcriptional regulator iscrDXI23_14700Not AvailablePositive3178354 - 317885118353.7
iscs subfamily cysteine desulfuraseDXI23_14705Not AvailablePositive3178874 - 318002240891.9
nucleoside-diphosphate kinaseDXI23_14710Not AvailablePositive3180091 - 318051915425.2
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDXI23_14715Not AvailablePositive3180583 - 318169541664.3
type iv pilus biogenesis/stability protein pilwDXI23_14720Not AvailablePositive3181770 - 318254328992.0
helix-turn-helix domain-containing proteinDXI23_14725Not AvailablePositive3182533 - 318357037310.1
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDXI23_14730Not AvailablePositive3183606 - 318472440392.6
histidine--trna ligaseDXI23_14735Not AvailablePositive3184774 - 318605447333.4
hypothetical proteinDXI23_14740Not AvailablePositive3186107 - 318676323800.6
outer membrane protein assembly factor bambDXI23_14745Not AvailablePositive3186763 - 318793542141.0

Displaying genes 2901 – 2910 of 4067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.