Marinobacter flavimaris str. KCTC 12185

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter flavimaris str. KCTC 12185 is a Gram-negative, non-spore-forming rod-shaped bacterium that thrives under anaerobic conditions, with an optimal growth temperature of 37.0°C. This organism is part of the Marinobacter genus, which is known for its diverse metabolic capabilities, particularly in marine environments. The Gram-negative nature of M. flavimaris suggests that it possesses a characteristic outer membrane, which may contribute to its environmental adaptability and could influence its interactions with other microorganisms in its habitat. The rod shape of this bacterium is typical for many members of the Marinobacter genus, facilitating motility and colonization in various substrates, particularly in aquatic environments. Given its anaerobic requirement, M. flavimaris str. KCTC 12185 likely plays a role in the degradation of organic matter in oxygen-limited environments, such as sediments or deep-sea habitats. This trait may contribute to biogeochemical cycles by facilitating the breakdown of complex organic compounds, thereby influencing nutrient availability in its ecosystem. The strain's optimal growth temperature of 37.0°C suggests it could be well-suited for environments that experience warm conditions, possibly including shallow marine ecosystems or coastal regions where temperature fluctuations are minimal. Further studies on M. flavimaris str. KCTC 12185 could elucidate its specific functions and interactions within microbial communities in these anaerobic niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter flavimaris
StrainKCTC 12185

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Marinobacter flavimaris str. KCTC 12185
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter flavimaris strain KCTC 12185 42, whole genome shotgun

Gene Summary

Adenine Count

957983 bp

Thymine Count

955841 bp

Guanine Count

1282642 bp

Cytosine Count

1265670 bp

Genome Length

4462136 bp

Protein-coding Genes

4010 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l11 methyltransferaseDXI23_12115Not AvailablePositive2589627 - 259052333090.8
duf3426 domain-containing proteinDXI23_12120Not AvailablePositive2590585 - 259184145603.4
trna dihydrouridine synthase dusbDXI23_12125Not AvailablePositive2592066 - 259306436637.9
dna-binding transcriptional regulator fisDXI23_12130Not AvailablePositive2593061 - 259337811598.8
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseDXI23_12135Not AvailablePositive2593463 - 259504356768.4
phosphoribosylamine--glycine ligaseDXI23_12140Not AvailablePositive2595056 - 259634245383.7
tonb-dependent receptorDXI23_12145Not AvailablePositive2596537 - 259867877723.7
alpha/beta hydrolaseDXI23_12150Not AvailablePositive2598863 - 259980134119.7
sodium:proton exchangerDXI23_12155Not AvailablePositive2599911 - 260148556565.3
ergothioneine biosynthesis protein egtbDXI23_12160Not AvailableNegative2601512 - 260287952769.7

Displaying genes 2391 – 2400 of 4067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.