Microbulbifer agarilyticus str. GP101

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Microbulbiferaceae

Genus

Microbulbifer

Description

Microbulbifer agarilyticus strain GP101 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe/anaerobe characteristics, thriving optimally at a temperature of 32.0 °C. This organism’s Gram-negative status indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and other microorganisms. The rod shape of M. agarilyticus suggests a possible adaptation to various ecological niches, facilitating motility and nutrient acquisition. As a facultative aerobe/anaerobe, M. agarilyticus has the metabolic flexibility to utilize oxygen when available, but can also switch to anaerobic respiration in its absence. This trait may confer an advantage in fluctuating environmental conditions, allowing it to survive in diverse habitats where oxygen levels can vary. Such metabolic versatility may also indicate a role in biogeochemical cycles, particularly in the breakdown of organic materials under differing oxygen conditions. Overall, the characteristics of Microbulbifer agarilyticus str. GP101 suggest its potential involvement in the degradation of complex organic substrates, which could have implications for nutrient cycling and energy flow in its native ecosystem. Further studies may elucidate its specific contributions to these processes and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyMicrobulbiferaceae
GenusMicrobulbifer
SpeciesMicrobulbifer agarilyticus
StrainGP101

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbulbifer agarilyticus strain GP101 chromosome, complete

Gene Summary

Adenine Count

948828 bp

Thymine Count

947456 bp

Guanine Count

1180546 bp

Cytosine Count

1178795 bp

Genome Length

4255625 bp

Protein-coding Genes

3456 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-ala-d/l-glu epimeraseMag101_RS10520Not AvailableNegative2561998 - 256297835320.0
soxr reducing system rsec family proteinMag101_RS10525Not AvailableNegative2563233 - 256370616184.8
mucb/rseb c-terminal domain-containing proteinMag101_RS10530Not AvailableNegative2563744 - 256478737802.0
sigma-e factor negative regulatory proteinMag101_RS10535Not AvailableNegative2564846 - 256554124766.2
rna polymerase sigma factor rpoeMag101_RS10540Not AvailableNegative2565781 - 256639523175.3
l-aspartate oxidaseMag101_RS10545Not AvailablePositive2566576 - 256821060829.8
protein ygfxMag101_RS17845Not AvailableNegative2568274 - 256880720016.4
succinate dehydrogenase assembly factor 2Mag101_RS10555Not AvailableNegative2568767 - 25690129869.75
ygfz/gcvt domain-containing proteinMag101_RS10560Not AvailablePositive2569152 - 257021338358.7
uracil-dna glycosylaseMag101_RS10565Not AvailableNegative2570283 - 257100526609.6

Displaying genes 2101 – 2110 of 3544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.