Bordetella bronchiseptica RB50

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Bordetella

Description

Bordetella bronchiseptica is the cause of chronic respiratory infections in a wide range of animals, but only occasionally in humans. (HAMAP: BORBR)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusBordetella
SpeciesBordetella bronchiseptica
StrainRB50

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Bordetella bronchiseptica RB50
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Bordetella bronchiseptica RB50, complete sequence.

Gene Summary

Adenine Count

850606 bp

Thymine Count

853819 bp

Guanine Count

1825282 bp

Cytosine Count

1809472 bp

Genome Length

5339179 bp

Protein-coding Genes

4860 genes

Non-Coding Genes

244 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
voc family proteinAYT36_RS06550Not AvailablePositive1389927 - 139034015406.3
copd family proteinAYT36_RS06555Not AvailableNegative1390348 - 139080016142.8
yajq family cyclic di-gmp-binding proteinAYT36_RS06560Not AvailablePositive1390931 - 139141317844.6
hypothetical proteinAYT36_RS06565Not AvailablePositive1391553 - 139192112961.5
rna polymerase sigma factorAYT36_RS06570Not AvailablePositive1391972 - 139249920076.1
anti-sigma factorAYT36_RS06575Not AvailablePositive1392496 - 139329928799.5
n-formylglutamate deformylaseAYT36_RS06580Not AvailableNegative1393321 - 139411228905.3
sdr family oxidoreductaseAYT36_RS06585Not AvailableNegative1394144 - 139484824533.3
surf1 family proteinAYT36_RS06590Not AvailableNegative1394923 - 139572328133.7
cytochrome o ubiquinol oxidase subunit ivAYT36_RS06595Not AvailableNegative1395720 - 139612714849.2

Displaying genes 1561 – 1570 of 5104 in total

Metabolites

1895 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da

Displaying 1–10 of 1895 metabolites

Health Effects

Health ConditionRelationReference
BordetellosisCausesPMC4618060

Displaying health effects 1 – 1 of 1 in total