Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. photiniae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1237192 bp
Thymine Count
1245892 bp
Guanine Count
1735223 bp
Cytosine Count
1720988 bp
Genome Length
5953927 bp
Protein-coding Genes
5523 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii alpha subunit | ALO53_02003 | P54394 | Positive | 699840 - 700454 | 22414.2 |
| transcription regulator asnc | ALO53_02004 | Q58133 | Negative | 700459 - 700926 | 17143.9 |
| uncharacterized protein | ALO53_02005 | P0AA72 | Positive | 701094 - 702008 | 31987.1 |
| atp-dependent rna helicase rhle | ALO53_100476 | P25888 | Positive | 702047 - 703399 | 49503.4 |
| pyridine nucleotide-disulfide oxidoreductase domain-containing protein | ALO53_04889 | Not Available | Negative | 703623 - 704897 | 45127.8 |
| histone deacetylase family protein | ALO53_04890 | P28606 | Negative | 704968 - 705915 | 35222.0 |
| acetyltransferase, gnat family | ALO53_02008 | Q9HX72 | Positive | 706006 - 706575 | 21514.8 |
| acyl-coa thioesterase ii | ALO53_02009 | P0AGG3 | Positive | 706715 - 707584 | 32746.7 |
| had family hydrolase | ALO53_100078 | Q8RYE9 | Positive | 707581 - 708171 | 21483.8 |
| unknown protein sequence | ALO53_02498 | Not Available | Positive | 709138 - 709338 | 6769.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
