Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. photiniae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1237192 bp
Thymine Count
1245892 bp
Guanine Count
1735223 bp
Cytosine Count
1720988 bp
Genome Length
5953927 bp
Protein-coding Genes
5523 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | ALO53_100462 | Not Available | Positive | 196097 - 197134 | 39636.5 |
| cystathionine beta-lyase | ALO53_01798 | Q52811 | Positive | 197220 - 198386 | 42191.4 |
| exodeoxyribonuclease 7 small subunit | ALO53_01799 | Q4ZYU6 | Positive | 198489 - 198734 | 9079.53 |
| geranyltranstransferase | ALO53_01800 | P22939 | Positive | 198731 - 199618 | 31562.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ALO53_01801 | Q48NX0 | Positive | 199779 - 201671 | 67817.7 |
| n-acylglucosamine 2-epimerase family protein | ALO53_01802 | P29954 | Positive | 201744 - 202958 | 45183.4 |
| short chain dehydrogenase | ALO53_01803 | Q1QU27 | Negative | 203001 - 203765 | 27395.7 |
| amino acid abc transporter atpase | ALO53_01804 | Not Available | Negative | 204483 - 205199 | 26244.0 |
| branched-chain amino acid transport atp-binding protein | ALO53_01805 | Not Available | Negative | 205196 - 206071 | 32303.3 |
| high-affinity branched-chain amino acid abc transporter, permease protein brae | ALO53_01806 | Not Available | Negative | 206068 - 207381 | 47240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
