Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. photiniae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1237192 bp
Thymine Count
1245892 bp
Guanine Count
1735223 bp
Cytosine Count
1720988 bp
Genome Length
5953927 bp
Protein-coding Genes
5523 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein f domain protein | ALO53_03698 | Not Available | Negative | 2099016 - 2099900 | 32219.9 |
| type ii secretion system protein f domain | ALO53_03699 | Not Available | Negative | 2099901 - 2100785 | 32682.6 |
| proteinral secretion pathway/type 4 pilus assembly protein | ALO53_03700 | P9WMT2 | Negative | 2100807 - 2102063 | 46183.1 |
| uncharacterized protein | ALO53_03701 | Not Available | Negative | 2102063 - 2103253 | 43176.9 |
| type ii and iii secretion system protein | ALO53_03702 | Not Available | Negative | 2103250 - 2104449 | 41713.8 |
| flp pilus assembly protein cpab | ALO53_03703 | Not Available | Negative | 2104521 - 2105480 | 34194.9 |
| response regulator | ALO53_03704 | Not Available | Positive | 2106071 - 2106478 | 15436.7 |
| penicillin-binding protein 1c | ALO53_03705 | P76577 | Negative | 2106499 - 2108847 | 86304.2 |
| permease of the major facilitator superfamily | ALO53_100000 | Not Available | Positive | 2108886 - 2109236 | 13097.3 |
| isppu14, transposase orf1 | ALO53_100542 | Not Available | Positive | 2109497 - 2109865 | 13185.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
