Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. photiniae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1237192 bp
Thymine Count
1245892 bp
Guanine Count
1735223 bp
Cytosine Count
1720988 bp
Genome Length
5953927 bp
Protein-coding Genes
5523 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO53_100163 | P40875 | Positive | 2013561 - 2014802 | 45202.5 |
| sarcosine oxidase, delta subunit family protein | ALO53_02098 | Q46336 | Positive | 2014816 - 2015121 | 11693.7 |
| sarcosine oxidase, alpha subunit family protein | ALO53_02099 | O87386 | Positive | 2015118 - 2018024 | 105940.0 |
| sarcosine oxidase gamma subunit | ALO53_02100 | Not Available | Positive | 2018028 - 2018600 | 20707.6 |
| unknown protein sequence | ALO53_05536 | Not Available | Negative | 2018872 - 2019924 | 37934.1 |
| methyl-accepting chemotaxis protein | ALO53_02101 | Not Available | Positive | 2020347 - 2020751 | 14601.1 |
| lysr-family transcriptional regulator | ALO53_02102 | P43011 | Negative | 2020919 - 2021785 | 30797.4 |
| metallo-beta-lactamase family protein | ALO53_02103 | Not Available | Positive | 2021895 - 2022770 | 31361.0 |
| uncharacterized protein | ALO53_02104 | Not Available | Positive | 2022865 - 2023263 | 14968.2 |
| hypothetical protein | ALO53_02105 | Not Available | Negative | 2023351 - 2023482 | 4738.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
