Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. photiniae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1237192 bp
Thymine Count
1245892 bp
Guanine Count
1735223 bp
Cytosine Count
1720988 bp
Genome Length
5953927 bp
Protein-coding Genes
5523 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO53_05341 | Not Available | Negative | 1257938 - 1258083 | 5019.87 |
| type iii effector hopau1 | ALO53_05164 | Not Available | Positive | 1258169 - 1260384 | 79838.3 |
| transcriptional regulator, lysr family | ALO53_03708 | Not Available | Negative | 1260445 - 1261407 | 35849.1 |
| cupin domain-containing protein | ALO53_03709 | P46852 | Positive | 1261542 - 1262264 | 26397.0 |
| uncharacterized protein | ALO53_03710 | Not Available | Positive | 1262393 - 1262854 | 16860.9 |
| rna polymerase associated protein rapa | ALO53_101900 | Q48LP5 | Negative | 1262982 - 1265915 | 109905.0 |
| hypothetical protein | ALO53_102012 | Not Available | Positive | 1265802 - 1266047 | 9671.74 |
| uncharacterized protein | ALO53_03239 | Not Available | Positive | 1266062 - 1266406 | 12575.8 |
| hypothetical protein | ALO53_100661 | Not Available | Positive | 1266471 - 1266662 | 7269.9 |
| type iii effector hopak1 | ALO53_101116 | O34819 | Negative | 1266881 - 1268503 | 57154.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
