Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. photiniae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1237192 bp
Thymine Count
1245892 bp
Guanine Count
1735223 bp
Cytosine Count
1720988 bp
Genome Length
5953927 bp
Protein-coding Genes
5523 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteinral secretion pathway protein gsph | ALO53_02669 | Not Available | Negative | 1104334 - 1104795 | 16841.6 |
| uncharacterized protein | ALO53_02670 | Not Available | Positive | 1104900 - 1105334 | 15211.7 |
| proteinral secretion pathway protein gspi | ALO53_02671 | Not Available | Negative | 1105340 - 1105684 | 12631.9 |
| pectate lyase | ALO53_02672 | P72242 | Negative | 1105672 - 1106559 | 31768.0 |
| sensor histidine kinase | ALO53_02673 | P10799 | Negative | 1106840 - 1108438 | 58155.6 |
| uncharacterized protein | ALO53_03280 | Not Available | Positive | 1108594 - 1108833 | 9283.53 |
| uncharacterized protein | ALO53_03281 | Not Available | Positive | 1108904 - 1109080 | 6335.7 |
| polygalacturonase | ALO53_02446 | P58598 | Positive | 1109111 - 1109344 | 7889.39 |
| uncharacterized protein | ALO53_03545 | Not Available | Positive | 1109489 - 1109749 | 10028.4 |
| type iii effector hopg1 | ALO53_03546 | Not Available | Positive | 1109955 - 1111502 | 56563.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
