Pseudomonas syringae pv. primulae

Pseudomonadati

Pseudomonadota

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

Description

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas syringae group genomosp. 3
Strain	No strain

Image source: Wikipedia/Wikimedia

Pseudomonas syringae pv. primulae strain ICMP3956

Adenine Count

1194203 bp

Thymine Count

1206197 bp

Guanine Count

1748296 bp

Cytosine Count

1744488 bp

Genome Length

5894791 bp

Protein-coding Genes

4930 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
pts transporter subunit iia-like nitrogen-regulatory protein ptsn	ALO52_02956	Q9HVV4	Negative	104463 - 104927	16721.2
ribosomal subunit interface protein	ALO52_02957	P0A147	Negative	104940 - 105248	11623.2
rna polymerase sigma-54 factor	ALO52_04874	P0A171	Negative	105323 - 106858	58396.2
abc transporter atp-binding protein	ALO52_02959	P0A9V3	Negative	107012 - 107737	26513.2
osta family protein	ALO52_02960	P0ADV3	Negative	107737 - 108285	19746.6
uncharacterized protein	ALO52_02961	Not Available	Negative	108272 - 108844	21492.5
phosphatase, yrbi family protein	ALO52_02962	Q8ZB47	Negative	108854 - 109393	19372.3
arabinose 5-phosphate isomerase	ALO52_02963	Q9HVW0	Negative	109394 - 110368	34641.2
toluene tolerance abc transporter atp-binding protein	ALO52_02964	P63388	Positive	110694 - 111503	29533.9
toluene tolerance proteinttg2b	ALO52_02965	P45030	Positive	111503 - 112300	28272.1

Displaying genes 111 – 120 of 5002 in total

0 pathways

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000217	alpha-ribazoleC14H18N2O4	Not available	Average278.3037Da Monoisotopic278.126657074Da
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000254	3-hydroxy-2-methylpropanoateC4H7O3	Not available	Average103.098Da Monoisotopic103.0400677Da
BASm0000277	keto-L-sorboseC6H12O6	Not available	Average180.1559Da Monoisotopic180.0633881Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000399	(S)-allantoinC4H6N4O3	`97-59-6`	Average158.1154Da Monoisotopic158.0439901Da
BASm0000401	(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8	Not available	Average286.218Da Monoisotopic286.0579371Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da