Pseudomonas syringae pv. viburni

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. viburni
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. viburni strain ICMP3963

Gene Summary

Adenine Count

1319456 bp

Thymine Count

1327986 bp

Guanine Count

1883926 bp

Cytosine Count

1873313 bp

Genome Length

6405504 bp

Protein-coding Genes

5702 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine o-acetyltransferaseALO40_04232Q59967Negative1036935 - 103788834331.1
putative pyridoxal phosphate-dependent deaminaseALO40_04233A8GFZ8Positive1038085 - 103911937074.0
cystine abc transporter periplasmic cystine binding proteinALO40_04234P0AEN0Positive1039287 - 104009329127.1
amino-acid abc transporter atp-binding protein yeccALO40_04235P37774Positive1040762 - 104150527265.3
uncharacterized proteinALO40_04236Not AvailablePositive1042078 - 104279726410.2
acyl-coa dehydrogenase family proteinALO40_04237Not AvailablePositive1043188 - 104451047872.8
acyl-coa dehydrogenase family proteinALO40_04238Q845S8Positive1044536 - 104574143477.9
monooxygenase, dsza family proteinALO40_04239A4IU28Positive1045741 - 104709950890.8
d-methionine-binding lipoprotein metqALO40_04240Q8ZRN1Positive1047351 - 104813928450.3
methionine import atp-binding protein metnALO40_04241Q87UV4Positive1048136 - 104926641316.4

Displaying genes 1021 – 1030 of 5828 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

323 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 323 metabolites

Health Effects

No health effects information available for this bacterium.