Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase flavoprotein, alpha-component | ALP71_05593 | Not Available | Positive | 887167 - 887510 | 12044.5 |
| hypothetical protein | ALP71_00513 | Not Available | Positive | 887623 - 892272 | 170248.0 |
| peptidase m23b | ALP71_00514 | Not Available | Positive | 892389 - 893291 | 32384.0 |
| 6-phosphogluconate dehydrogenase-like protein | ALP71_04413 | Not Available | Negative | 893444 - 893660 | 7728.11 |
| dimethylmenaquinone methyltransferase | ALP71_04635 | Not Available | Positive | 893661 - 894356 | 24768.0 |
| phosphofructokinase | ALP71_03002 | Not Available | Negative | 895454 - 896395 | 32779.7 |
| peptide abc transporter permease | ALP71_00184 | Not Available | Positive | 897011 - 897983 | 35255.2 |
| binding-protein dependent transport system inner membrane protein | ALP71_00185 | Not Available | Positive | 897983 - 898879 | 31750.1 |
| peptide abc transporter atp-binding protein | ALP71_03852 | Not Available | Positive | 898870 - 900322 | 53865.0 |
| 23s rrna -methyltransferase rlmd | ALP71_05012 | Not Available | Negative | 900323 - 900897 | 20934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
