Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion transport protein | ALP71_04460 | Not Available | Negative | 834400 - 834872 | 18072.6 |
| ribosomal protein alanine acetyltransferase | ALP71_02715 | Not Available | Negative | 835436 - 835984 | 20893.9 |
| glucose dehydrogenase | ALP71_00815 | Not Available | Positive | 836060 - 836980 | 32834.6 |
| pca operon transcription factor pcaq | ALP71_00123 | Not Available | Positive | 837356 - 838206 | 30539.1 |
| protocatechuate 3,4-dioxygenase, beta subunit | ALP71_00124 | Not Available | Positive | 838301 - 839053 | 27986.4 |
| protocatechuate 3,4-dioxygenase, alpha subunit | ALP71_00125 | Not Available | Positive | 839065 - 839667 | 22401.3 |
| 4-hydroxybenzoate transporter | ALP71_03830 | Not Available | Positive | 839736 - 840610 | 31255.3 |
| mg chelatase-related protein | ALP71_03149 | Not Available | Positive | 840611 - 841410 | 29367.0 |
| type iii effector hopy1 | ALP71_03150 | Not Available | Positive | 841460 - 842389 | 33407.1 |
| citrate transporter | ALP71_03151 | Not Available | Negative | 842517 - 843824 | 46453.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
