Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP71_05548 | Not Available | Negative | 774098 - 774415 | 11247.6 |
| proteinral secretion pathway protein g | ALP71_01374 | Not Available | Positive | 774471 - 774784 | 10925.6 |
| proteinral secretion pathway protein h | ALP71_01375 | Not Available | Positive | 774793 - 775227 | 15586.0 |
| proteinral secretion pathway protein gspi | ALP71_01376 | Not Available | Positive | 775227 - 775598 | 13208.9 |
| type iii effector hopr1 | ALP71_04000 | Not Available | Positive | 775889 - 777403 | 53871.9 |
| hypothetical protein | ALP71_04361 | Not Available | Negative | 777404 - 778588 | 42169.5 |
| histone deacetylase protein | ALP71_01081 | Not Available | Negative | 778650 - 779573 | 34204.9 |
| atpase provides energy for both assembly of type iv secretion complex and secretion of t-dna complex | ALP71_04354 | Not Available | Negative | 779656 - 779913 | 9369.26 |
| hypothetical protein | ALP71_00737 | Not Available | Positive | 780540 - 782042 | 55519.7 |
| gntr family transcriptional regulator | ALP71_00738 | Not Available | Positive | 782045 - 783445 | 52087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
