Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, lysr substrate-binding protein | ALP71_05332 | Not Available | Positive | 725803 - 726520 | 26192.5 |
| aminotransferase, s v | ALP71_04443 | Not Available | Positive | 726521 - 726747 | 8428.06 |
| acetyl-coa synthetase | ALP71_04630 | Not Available | Positive | 726781 - 727652 | 32242.4 |
| metallophosphoesterase | ALP71_00154 | Not Available | Negative | 727941 - 728106 | 6211.36 |
| transcriptional regulatory protein nfxb | ALP71_04164 | Not Available | Negative | 728107 - 728547 | 16307.8 |
| secretion protein hlyd | ALP71_00771 | Not Available | Positive | 728619 - 729779 | 40971.9 |
| hydrophobe/amphiphile efflux-1 hae1 | ALP71_04165 | Not Available | Positive | 729807 - 731840 | 72583.1 |
| atp-binding mrp/nbp35 protein | ALP71_00083 | Not Available | Negative | 731951 - 733045 | 38601.7 |
| methionine--trna ligase | ALP71_00084 | Not Available | Positive | 733220 - 735268 | 75819.2 |
| iron-sulfur cluster-binding protein | ALP71_00085 | Not Available | Positive | 735393 - 736268 | 31167.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
