Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | ALP71_01257 | Not Available | Negative | 15075 - 15566 | 17846.3 |
| inner membrane protein forms channel for type iv secretion of t-dna complex | ALP71_04836 | Not Available | Negative | 15571 - 15730 | 5964.05 |
| inner membrane protein forms channel for type iv secretion of t-dna complex | ALP71_01628 | Not Available | Negative | 15816 - 16178 | 12956.6 |
| 50s ribosomal protein l25 | ALP71_00501 | Not Available | Negative | 16608 - 17345 | 26969.4 |
| ribose-phosphate pyrophosphokinase | ALP71_00502 | Not Available | Negative | 17361 - 18308 | 34375.6 |
| Trna-gln | Not Available | Not Available | Positive | 18348 - 18422 | Not Available |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | ALP71_100506 | Not Available | Negative | 18460 - 19308 | 30627.1 |
| outer-membrane lipoprotein lolb | ALP71_00503 | Not Available | Negative | 19311 - 19928 | 22947.3 |
| hypothetical protein | ALP71_200275 | Not Available | Positive | 20768 - 21463 | 26136.3 |
| hypothetical protein | ALP71_200016 | Not Available | Positive | 21450 - 21908 | 17038.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
