Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase 1 | ALP71_02452 | Not Available | Negative | 708618 - 709163 | 20098.7 |
| smr domain-containing protein | ALP71_02453 | Not Available | Negative | 709382 - 709939 | 20797.2 |
| hypothetical protein | ALP71_02454 | Not Available | Negative | 710020 - 710301 | 9680.76 |
| isochorismatase protein | ALP71_05215 | Not Available | Negative | 710448 - 711254 | 28837.4 |
| 50s ribosomal protein l3 glutamine methyltransferase | ALP71_05214 | Not Available | Positive | 711055 - 712194 | 42805.9 |
| ribbon-helix-helix domain protein | ALP71_03304 | Not Available | Positive | 712600 - 713010 | 15560.9 |
| aspartate--trna ligase | ALP71_03305 | Not Available | Positive | 713295 - 715070 | 66406.5 |
| putative transcriptional regulatory protein | ALP71_03306 | Not Available | Positive | 715175 - 715933 | 27200.8 |
| crossover junction endodeoxyribonuclease ruvc | ALP71_03307 | Not Available | Positive | 715978 - 716589 | 21358.1 |
| holliday junction atp-dependent dna helicase ruva | ALP71_03308 | Not Available | Positive | 716673 - 717281 | 22134.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
