Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cointegrate resolution protein s | ALP71_02656 | Not Available | Negative | 687503 - 688462 | 35727.7 |
| cointegrate resolution protein t | ALP71_02657 | Not Available | Positive | 688638 - 689648 | 38498.9 |
| hypothetical protein | ALP71_02788 | Not Available | Positive | 689818 - 690335 | 18865.5 |
| prophage pspph01, dna-binding protein | ALP71_101902 | Not Available | Positive | 690332 - 690532 | 7470.04 |
| type iii effector hopg1 | ALP71_05341 | Not Available | Positive | 691159 - 691449 | 10625.4 |
| type iii effector hopg1 | ALP71_02789 | Not Available | Positive | 691379 - 692641 | 46762.4 |
| transposase | ALP71_02790 | Not Available | Negative | 692739 - 693155 | 16181.0 |
| isps1, transposase orfa | ALP71_05342 | Not Available | Negative | 693170 - 693451 | 10356.5 |
| integrase | ALP71_02791 | Not Available | Negative | 693796 - 694974 | 45163.3 |
| hypothetical protein | ALP71_02792 | Not Available | Negative | 695569 - 696078 | 18355.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
