Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | ALP71_00060 | Not Available | Negative | 621429 - 622145 | 25923.1 |
| zinc abc transporter permease | ALP71_00061 | Not Available | Negative | 622184 - 622972 | 27459.0 |
| zinc import atp-binding protein znuc | ALP71_00062 | Not Available | Negative | 622965 - 623753 | 28531.7 |
| putative zinc uptake regulation protein | ALP71_100142 | Not Available | Negative | 623753 - 624235 | 17151.7 |
| zinc abc transporter periplasmic zinc-binding protein | ALP71_00063 | Not Available | Positive | 624294 - 625499 | 43545.2 |
| alginate biosynthesis protein alga | ALP71_00064 | Not Available | Positive | 625619 - 627070 | 53512.1 |
| hypothetical protein | ALP71_00065 | Not Available | Positive | 627346 - 627699 | 12672.0 |
| hypothetical protein | ALP71_00066 | Not Available | Positive | 627726 - 628298 | 20923.4 |
| short chain dehydrogenase | ALP71_00067 | Not Available | Positive | 628317 - 629135 | 28577.7 |
| hlyd family secretion protein | ALP71_03794 | Not Available | Negative | 629186 - 630076 | 32997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
