Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP71_02196 | Not Available | Negative | 567434 - 569557 | 80330.9 |
| response regulator | ALP71_02197 | Not Available | Negative | 570053 - 570508 | 16500.5 |
| deoxyguanosinetriphosphate triphosphohydrolase-like protein | ALP71_05101 | Not Available | Negative | 570702 - 571034 | 12143.8 |
| fumarylacetoacetase | ALP71_04767 | Not Available | Positive | 571115 - 571363 | 9007.58 |
| potassium efflux system protein phac | ALP71_00746 | Not Available | Positive | 573588 - 573932 | 12274.4 |
| putative monovalent cation/h+ antiporter subunit d | ALP71_04153 | Not Available | Positive | 573869 - 574339 | 17042.4 |
| impa-like protein | ALP71_04179 | Not Available | Negative | 574340 - 574564 | 8242.42 |
| hcp1 family type vi secretion system effector | ALP71_00787 | Not Available | Negative | 574651 - 575181 | 18869.1 |
| ompa domain-containing protein | ALP71_04180 | Not Available | Negative | 575316 - 576896 | 59743.2 |
| periplasmic folding chaperone | ALP71_04257 | Not Available | Negative | 576925 - 577822 | 33410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
