Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory factor xdhc | ALP71_02534 | Not Available | Positive | 523556 - 524524 | 33786.9 |
| flavin reductase-like domain protein | ALP71_100532 | Not Available | Positive | 525234 - 525833 | 22274.6 |
| aldehyde dehydrogenase protein | ALP71_02535 | Not Available | Negative | 525974 - 527446 | 53241.5 |
| signal recognition particle protein | ALP71_02536 | Not Available | Positive | 527463 - 529466 | 72380.7 |
| 30s ribosomal protein s16 | ALP71_02537 | Not Available | Positive | 529714 - 529971 | 9594.45 |
| ribosome maturation factor rimm | ALP71_02538 | Not Available | Positive | 529977 - 530516 | 20105.1 |
| trna -methyltransferase | ALP71_02539 | Not Available | Positive | 530522 - 531274 | 28004.2 |
| 50s ribosomal protein l19 | ALP71_02540 | Not Available | Positive | 531319 - 531669 | 12955.9 |
| sarcosine oxidase, subunit gamma | ALP71_05357 | Not Available | Negative | 531801 - 532316 | 17360.8 |
| hypothetical protein | ALP71_02189 | Not Available | Positive | 533969 - 534163 | 6496.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
