Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Integrase | ALP71_100790 | Not Available | Negative | 3258143 - 3259423 | 48445.3 |
| Nuclease | ALP71_02175 | Not Available | Negative | 3259420 - 3259851 | 16019.9 |
| Hypothetical protein | ALP71_02176 | Not Available | Negative | 3259848 - 3260153 | 11165.5 |
| Putative replication protein p | ALP71_02177 | Not Available | Negative | 3260150 - 3260896 | 27565.2 |
| hypothetical protein | ALP71_04600 | Not Available | Positive | 1 - 252 | 9291.97 |
| leucine-rich repeat-containing protein | ALP71_04133 | Not Available | Negative | 253 - 2098 | 69668.6 |
| aromatic acid decarboxylase | ALP71_00425 | Not Available | Negative | 2348 - 2977 | 22712.6 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ALP71_00426 | Not Available | Negative | 2974 - 4329 | 48534.3 |
| hypothetical protein | ALP71_101220 | Not Available | Positive | 4318 - 4446 | 4840.83 |
| aldehyde dehydrogenase protein | ALP71_00427 | Not Available | Positive | 4549 - 6069 | 54873.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
