Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase protein | ALP71_103075 | Not Available | Negative | 474271 - 475494 | 45401.6 |
| glycosyl transferase, family 2 | ALP71_102862 | Not Available | Negative | 475491 - 476492 | 37596.2 |
| transcription antitermination protein rfah | ALP71_02328 | Not Available | Negative | 476563 - 477081 | 19584.7 |
| low molecular weight phosphotyrosine protein phosphatase | ALP71_02329 | Not Available | Negative | 479328 - 479786 | 16859.4 |
| group 2 family glycosyl transferase | ALP71_02330 | Not Available | Negative | 479776 - 480702 | 34802.8 |
| polysaccharide biosynthesis protein | ALP71_02331 | Not Available | Negative | 480706 - 482235 | 55970.8 |
| aminotransferase, degt/dnrj/eryc1/strs protein | ALP71_02332 | Not Available | Negative | 482238 - 483371 | 41507.4 |
| peptidase, m24 protein | ALP71_05162 | Not Available | Positive | 484028 - 484258 | 8639.2 |
| snf2-related:helicase | ALP71_03010 | Not Available | Positive | 484296 - 486329 | 76835.4 |
| isochorismatase hydrolase | ALP71_03011 | Not Available | Negative | 486345 - 486914 | 20825.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
