Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ALP71_02203 | Not Available | Positive | 455610 - 456206 | 21806.8 |
| putative proteinh:flavin oxidoreductase h oxidase protein | ALP71_02204 | Not Available | Positive | 456458 - 457540 | 38265.2 |
| short chain dehydrogenase/reductase family oxidoreductase | ALP71_05107 | Not Available | Positive | 457589 - 458377 | 28044.8 |
| short chain dehydrogenase | ALP71_02206 | Not Available | Positive | 458480 - 459292 | 28934.8 |
| putative transporter-like membrane protein | ALP71_02207 | Not Available | Negative | 459318 - 459914 | 20665.8 |
| homocysteine s-methyltransferase protein | ALP71_03045 | Not Available | Negative | 460030 - 460626 | 21093.9 |
| amino acid abc transporter substrate-binding protein | ALP71_03046 | Not Available | Positive | 460894 - 461715 | 30025.6 |
| amino acid abc transporter permease | ALP71_03047 | Not Available | Positive | 461712 - 462545 | 30648.3 |
| hypothetical protein | ALP71_03048 | Not Available | Negative | 462772 - 463059 | 11133.2 |
| hypothetical protein | ALP71_03049 | Not Available | Negative | 463126 - 463629 | 18378.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
