Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter solute binding protein | ALP71_04125 | Not Available | Negative | 372279 - 372517 | 8640.49 |
| rok protein | ALP71_04454 | Not Available | Negative | 372520 - 372734 | 8100.08 |
| glycerol-3-phosphate abc transporter periplasmic glycerol-3-phosphate-binding protein | ALP71_01189 | Not Available | Positive | 372892 - 374208 | 47523.2 |
| glycerol-3-phosphate abc transporter permease | ALP71_04455 | Not Available | Positive | 374999 - 375480 | 17367.5 |
| lon protease | ALP71_05742 | Not Available | Negative | 375481 - 377444 | 73346.0 |
| atp-dependent clp protease atp-binding subunit clpx | ALP71_03720 | Not Available | Negative | 377619 - 378902 | 46959.2 |
| atp-dependent clp protease proteolytic subunit | ALP71_100027 | Not Available | Negative | 379009 - 379659 | 23953.8 |
| membrane-bound lytic murein transglycosylase a precursor | ALP71_100903 | Not Available | Negative | 380958 - 382006 | 37340.2 |
| acetyltransferase | ALP71_00519 | Not Available | Negative | 382122 - 382607 | 18339.0 |
| s-glutathione dehydrogenase/s iii alcohol dehydrogenase | ALP71_05665 | Not Available | Positive | 384157 - 384327 | 6193.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
