Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose 5-phosphate isomerase | ALP71_03636 | Not Available | Positive | 326908 - 327882 | 34427.0 |
| peptide abc transporter atp-binding protein | ALP71_04984 | Not Available | Positive | 327957 - 328129 | 6149.4 |
| hypothetical protein | ALP71_01894 | Not Available | Positive | 328241 - 328627 | 14993.5 |
| asnc family transcriptional regulator | ALP71_01895 | Not Available | Negative | 328751 - 329242 | 18628.7 |
| putative had superfamily hydrolase | ALP71_01896 | Not Available | Negative | 329286 - 329960 | 25225.4 |
| 5-aminovalerate aminotransferase / 4-aminobutyrate aminotransferase | ALP71_100635 | Not Available | Negative | 330024 - 331343 | 47309.5 |
| d-isomer specific 2-hydroxyacid dehydrogenase protein | ALP71_01897 | Not Available | Positive | 331401 - 332543 | 42332.5 |
| hypothetical protein | ALP71_01898 | Not Available | Positive | 332646 - 333836 | 41333.5 |
| putative phosphoenolpyruvate synthase regulatory protein | ALP71_01899 | Not Available | Negative | 333842 - 334702 | 32639.9 |
| hypothetical protein | ALP71_05269 | Not Available | Positive | 334797 - 335030 | 8673.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
