Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP71_01495 | Not Available | Negative | 282489 - 283027 | 20074.8 |
| hypothetical protein | ALP71_03910 | Not Available | Negative | 283028 - 283221 | 6845.3 |
| sigma-54 dependent transcriptional regulator | ALP71_04138 | Not Available | Positive | 285045 - 285997 | 34444.4 |
| rna polymerase-binding transcription factor dksa | ALP71_02893 | Not Available | Positive | 286102 - 286542 | 17007.2 |
| glutamyl-q trna synthetase | ALP71_02894 | Not Available | Positive | 286642 - 287622 | 36686.1 |
| mfs transporter | ALP71_02895 | Not Available | Positive | 287721 - 287897 | 6969.75 |
| sensor histidine kinase | ALP71_05389 | Not Available | Positive | 287881 - 289079 | 43590.4 |
| hypothetical protein | ALP71_02426 | Not Available | Positive | 289080 - 289286 | 8136.44 |
| pirin | ALP71_02427 | Not Available | Positive | 289417 - 290271 | 31512.6 |
| lysine exporter protein lyse/ygga | ALP71_01838 | Not Available | Positive | 291527 - 291747 | 7710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
