Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e | ALP71_02733 | Not Available | Negative | 159983 - 160459 | 16561.8 |
| putative kinase | ALP71_00055 | Not Available | Negative | 160985 - 161875 | 32229.3 |
| ggdef domain protein | ALP71_00056 | Not Available | Negative | 162018 - 163085 | 38982.6 |
| hypothetical protein | ALP71_03791 | Not Available | Positive | 163404 - 163626 | 8543.35 |
| helix-turn-helix, fis-type | ALP71_04678 | Not Available | Positive | 163627 - 163897 | 9496.18 |
| hypothetical protein | ALP71_04595 | Not Available | Positive | 163898 - 164129 | 8337.89 |
| ribose abc transporter atp-binding protein | ALP71_00947 | Not Available | Positive | 164130 - 164702 | 20460.5 |
| hypothetical protein | ALP71_03772 | Not Available | Positive | 166661 - 167334 | 25119.7 |
| autotransporter | ALP71_03946 | Not Available | Negative | 167335 - 168246 | 30504.9 |
| type iv secretion system protein | ALP71_03393 | Not Available | Negative | 168686 - 169366 | 25605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
