Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | ALP71_04428 | Not Available | Negative | 152535 - 152790 | 9145.0 |
| penicillin-binding protein 1c | ALP71_05527 | Not Available | Negative | 152843 - 153922 | 39140.2 |
| hypothetical protein | ALP71_00169 | Not Available | Positive | 154415 - 154692 | 10317.8 |
| hypothetical protein | ALP71_00170 | Not Available | Positive | 154807 - 155163 | 13535.9 |
| transcriptional regulator tyrr | ALP71_03846 | Not Available | Positive | 155301 - 156439 | 40945.6 |
| 50s ribosomal protein l31 | ALP71_04523 | Not Available | Positive | 156440 - 156601 | 5799.02 |
| tetraacyldisaccharide 4'-kinase | ALP71_02729 | Not Available | Positive | 156883 - 157813 | 33891.9 |
| hypothetical protein | ALP71_02730 | Not Available | Positive | 157831 - 158016 | 6628.22 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | ALP71_02731 | Not Available | Positive | 158013 - 158777 | 27460.8 |
| udp-n-acetylenolpyruvoylglucosamine reductase | ALP71_02732 | Not Available | Positive | 158812 - 159831 | 37293.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
