Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas coronafaciens |
| Strain | pv. garcae |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Coffea arabica, Coffea |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1219414 bp
Thymine Count
1213113 bp
Guanine Count
1657005 bp
Cytosine Count
1656439 bp
Genome Length
5923901 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | ALP71_01634 | Not Available | Positive | 39513 - 40154 | 24072.4 |
| 3-isopropylmalate dehydrogenase | ALP71_01635 | Not Available | Positive | 40266 - 41384 | 40313.8 |
| aspartate-semialdehyde dehydrogenase | ALP71_01636 | Not Available | Positive | 41377 - 42567 | 43000.1 |
| 2-dehydro-3-deoxygalactonate kinase | ALP71_01637 | Not Available | Positive | 42694 - 43600 | 31960.6 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | ALP71_01638 | Not Available | Positive | 43602 - 44237 | 22024.0 |
| galactonate dehydratase | ALP71_100502 | Not Available | Positive | 44161 - 45395 | 45453.6 |
| mfs transporter, phthalate permease family | ALP71_04854 | Not Available | Positive | 45466 - 46360 | 33425.0 |
| gcn5-related n-acetyltransferase | ALP71_04728 | Not Available | Negative | 46361 - 46847 | 17917.6 |
| aminotransferase, s i and ii | ALP71_04758 | Not Available | Negative | 46848 - 47206 | 13652.3 |
| hypothetical protein | ALP71_200100 | Not Available | Positive | 47440 - 47826 | 14262.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
