Gloeobacter violaceus PCC 7421

Gram-negativeRodNon-motile

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Gloeobacterales

Family

Gloeobacteraceae

Genus

Gloeobacter

Description

Gloeobacter violaceus PCC 7421 is a unicellular cyanobacterium. Cyanobacteria are aquatic and photosynthetic (which results in them being labelled blue-green algae) they live in the water, and can manufacture their own food, they are quite small and usually unicellular, though they often grow in colonies large enough to be visible with the human eye.Gloeobacter violaceus performs photosynthesis in a different part of the cell than other cyanobacteria.Comparison of the assigned gene components with those of other cyanobacteria has unveiled distinctive features of the G. violaceus genome. Genes for PsaI, PsaJ, PsaK, and PsaX for Photosystem I and PsbY, PsbZ and Psb27 for Photosystem II were missing, and those for PsaF, PsbO, PsbU, and PsbV were poorly conserved. cpcG for a rod core linker peptide for phycobilisomes and nblA related to the degradation of phycobilisomes were also missing. Potential signal peptides of the presumptive products of petJ and petE for soluble electron transfer catalysts were less conserved than the remaining portions. These observations may be related to the fact that photosynthesis in G. violaceus takes place not in thylakoid membranes but in the cytoplasmic membrane.A large number of genes for sigma factors and transcription factors in the LuxR, LysR, PadR, TetR, and MarR families could be identified, while those for major elements for circadian clock, kaiABC were not found.The sequenced strain PCC 7421 was found in rock in Switzerland.Phylogenetic analysis using multiple criteria strongly suggest that this strain is a member of early branching lineage. (From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderGloeobacterales
FamilyGloeobacteraceae
GenusGloeobacter
SpeciesGloeobacter violaceus
StrainPCC 7421

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Gloeobacter violaceus PCC 7421
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhotoautotroph - Photosynthetic
PathogenicityNo

Genome Summary

Gloeobacter violaceus PCC 7421


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4052 genes

Non-Coding Genes

552 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dockerin type i domain-containing proteinGLL_RS00300Not AvailablePositive61425 - 6251638553.8
dockerin type i domain-containing proteinGLL_RS00305Not AvailablePositive62566 - 6369939810.1
glycine zipper 2tm domain-containing proteinGLL_RS00310Not AvailableNegative63740 - 6487938976.2
luxr c-terminal-related transcriptional regulatorGLL_RS00315Not AvailableNegative64964 - 6566825633.5
uracil phosphoribosyltransferaseGLL_RS00320Not AvailableNegative65718 - 6638623611.1
duf3155 domain-containing proteinGLL_RS00325Not AvailableNegative66396 - 6671012017.5
hypothetical proteinGLL_RS00330Not AvailableNegative66796 - 6723316152.6
dna polymerase iii subunit deltaGLL_RS00335Not AvailableNegative67312 - 6827735125.4
s41 family peptidaseGLL_RS00340Not AvailableNegative68283 - 6954245544.0
hpt domain-containing proteinGLL_RS00345Not AvailableNegative69600 - 6998013685.4

Displaying genes 61 – 70 of 4604 in total

Metabolites

1817 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1817 metabolites

Health Effects

No health effects information available for this bacterium.