Nocardia farcinica IFM 10152

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Gram-positive, filamentous-growing soil saprophyte. It can cause the disease nocardiosis in humans: an acute, subacute, or chronic infectious disease occurring in cutaneous and pulmonary tissues, and also in the central nervous system.(From http://www.expasy.org/sprot/hamap/NOCFA.html) (BacMap)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia farcinica
StrainIFM 10152

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Nocardia farcinica IFM 10152
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityYes

Genome Summary

Nocardia farcinica IFM 10152, complete sequence.

Gene Summary

Adenine Count

878196 bp

Thymine Count

877989 bp

Guanine Count

2135311 bp

Cytosine Count

2129729 bp

Genome Length

6021225 bp

Protein-coding Genes

5600 genes

Non-Coding Genes

195 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf742 domain-containing proteinNFA_RS03400Not AvailablePositive693439 - 69381313567.3
gtp-binding proteinNFA_RS03405Not AvailablePositive693794 - 69439621787.1
carboxyl transferase domain-containing proteinNFA_RS03410Not AvailablePositive694420 - 69597654771.7
aldo/keto reductaseNFA_RS03415Not AvailablePositive696034 - 69688531109.8
nad(p)-binding domain-containing proteinNFA_RS03420Not AvailableNegative696869 - 69799340624.2
enoyl-coa hydrataseNFA_RS03425Not AvailablePositive698083 - 69881125769.0
mbl fold metallo-hydrolaseNFA_RS03430Not AvailablePositive698808 - 69995340750.6
antitoxinNFA_RS03435Not AvailablePositive700031 - 7002437474.87
atp-dependent dna ligaseNFA_RS03440Not AvailablePositive700299 - 70272588638.0
antitoxinNFA_RS03445Not AvailablePositive702831 - 7030106107.15

Displaying genes 831 – 840 of 6067 in total

Metabolites

92 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001369peroxynitriteNO3Chemical structure of peroxynitrite19059-14-4
Average62.0049Da
Monoisotopic61.987817871Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001772maleateC4H2O4Chemical structure of maleateNot available
Average114.057Da
Monoisotopic113.996405704Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 92 metabolites

Health Effects

No health effects information available for this bacterium.