Nocardia farcinica IFM 10152

Gram-positiveRodMotileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Gram-positive, filamentous-growing soil saprophyte. It can cause the disease nocardiosis in humans: an acute, subacute, or chronic infectious disease occurring in cutaneous and pulmonary tissues, and also in the central nervous system.(From http://www.expasy.org/sprot/hamap/NOCFA.html) (BacMap)

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Mycobacteriales
Family	Nocardiaceae
Genus	Nocardia
Species	Nocardia farcinica
Strain	IFM 10152

Profile

Physiology
Gram staining properties	Positive
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	1

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobe
Optimal temperature	37
Temperature range	Mesophilic
Habitat	Multiple
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Filaments
Sporulation	Sporulating
Energy source	Chemoheterotroph
Pathogenicity	Yes

Genome Summary

Nocardia farcinica IFM 10152, complete sequence.

NC_006361.1 NC_006362.1 NC_006363.1

Gene Summary

Adenine Count

878196 bp

Thymine Count

877989 bp

Guanine Count

2135311 bp

Cytosine Count

2129729 bp

Genome Length

6021225 bp

Protein-coding Genes

5600 genes

Non-Coding Genes

195 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	NFA_RS19580	Not Available	Negative	4126694 - 4126993	11452.0
Hypothetical protein	NFA_RS19585	Not Available	Negative	4126974 - 4127342	13269.4
Head-to-tail connector complex protein	NFA_RS29755	Not Available	Negative	4127336 - 4127758	14848.4
hypothetical protein	NFA_RS19595	Not Available	Negative	4127758 - 4127985	8368.59
Major capsid protein	NFA_RS19600	Not Available	Negative	4128067 - 4128990	33345.8
Hypothetical protein	NFA_RS33325	Not Available	Negative	4129005 - 4129736	25749.6
Trna-gln;	Not Available	Not Available	Positive	4129958 - 4130030	Not Available
hypothetical protein	NFA_RS19615	Not Available	Negative	4130041 - 4130328	10284.7
Hypothetical protein	NFA_RS19620	Not Available	Negative	4130325 - 4130717	14618.2
Issod6, transposase	NFA_RS19625	Not Available	Positive	4130850 - 4131743	33583.3

Displaying genes 151 – 160 of 6067 in total

Pathways

753 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Taurine Metabolism

TCA Cycle

Glycolysis and Pyruvate Dehydrogenase

Arginine Metabolism

Ornithine Metabolism

Show All 753 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000716	4-methylsulfanyl-2-oxobutanoateC5H7O3S	Not available	Average147.17Da Monoisotopic147.012138839Da
BASm0000989	GlycerolC3H8O3	`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da
BASm0001369	peroxynitriteNO3	`19059-14-4`	Average62.0049Da Monoisotopic61.987817871Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001772	maleateC4H2O4	Not available	Average114.057Da Monoisotopic113.996405704Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da

Displaying 1–10 of 92 metabolites

Health Effects

No health effects information available for this bacterium.