Candidatus Burkholderia verschuerenii str. UZHbot4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesCandidatus Burkholderia verschuerenii
StrainUZHbot4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Burkholderia verschuerenii strain UZHbot4 BVERctg488,

Gene Summary

Adenine Count

1177059 bp

Thymine Count

1178787 bp

Guanine Count

1922542 bp

Cytosine Count

1910092 bp

Genome Length

6188480 bp

Protein-coding Genes

4492 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malonyl coa-acyl carrier protein transacylaseBVER_05876O85140Positive924019 - 92495132109.9
3-oxoacyl-[acyl-carrier protein] reductaseBVER_05877P55336Positive924963 - 92570325365.7
acyl carrier proteinBVER_05878A0K5U9Positive925953 - 9261928712.21
3-oxoacyl-[acyl-carrier-protein] synthase, kasiiBVER_05879Not AvailablePositive926337 - 92757843637.0
hypothetical proteinBVER_05880Not AvailablePositive927610 - 92806216103.5
rna polymerase sigma factor rpoeBVER_05881P0AGB8Positive928160 - 92875922718.3
sigma factor rpoe negative regulatory protein rseaBVER_05882Not AvailablePositive928841 - 92947922349.1
sigma factor rpoe negative regulatory protein rseb precursorBVER_05883Not AvailablePositive929510 - 93055338214.8
htra protease/chaperone proteinBVER_05884B1J4D7Positive930571 - 93212753875.1
putative thioredoxinBVER_05885Not AvailablePositive932134 - 9323919684.66

Displaying genes 711 – 720 of 4543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

346 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da

Displaying 1–10 of 346 metabolites

Health Effects

No health effects information available for this bacterium.