Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | ATCC 29413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413 plasmid B, complete sequence.
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bama/tama family outer membrane protein | AVA_RS00470 | Not Available | Positive | 126211 - 128727 | 90163.1 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | AVA_RS00475 | Not Available | Positive | 128861 - 129703 | 30194.9 |
| 3-hydroxyacyl-acp dehydratase fabz | AVA_RS00480 | Not Available | Positive | 129780 - 130295 | 18989.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | AVA_RS00485 | Not Available | Positive | 130544 - 131362 | 29497.0 |
| lipid-a-disaccharide synthase | AVA_RS00490 | Not Available | Positive | 131492 - 132646 | 42317.0 |
| type ii toxin-antitoxin system hicb family antitoxin | AVA_RS00495 | Not Available | Negative | 132913 - 133137 | 8411.9 |
| uma2 family endonuclease | AVA_RS00500 | Not Available | Negative | 133254 - 133838 | 22199.3 |
| dna cytosine methyltransferase | AVA_RS00505 | Not Available | Positive | 134074 - 135369 | 48731.6 |
| cmcj/nvfi family oxidoreductase | AVA_RS00510 | Not Available | Negative | 135499 - 136359 | 32644.3 |
| nad(p)-binding domain-containing protein | AVA_RS00515 | Not Available | Negative | 136399 - 137841 | 53234.8 |
Pathways
1332 pathways
Health Effects
No health effects information available for this bacterium.
