Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | ATCC 29413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413 plasmid B, complete sequence.
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | AVA_RS00275 | Not Available | Positive | 67154 - 68929 | 67265.8 |
| peptidoglycan-binding domain-containing protein | AVA_RS00280 | Not Available | Negative | 68966 - 69448 | 17843.2 |
| glutamate-5-semialdehyde dehydrogenase | AVA_RS00285 | Not Available | Positive | 70226 - 71530 | 46947.4 |
| response regulator | AVA_RS00290 | Not Available | Positive | 72155 - 73198 | 39511.8 |
| pled family two-component system response regulator | AVA_RS00295 | Not Available | Positive | 73215 - 73592 | 13951.3 |
| chemotaxis protein chew | AVA_RS00300 | Not Available | Positive | 73597 - 74106 | 18888.2 |
| methyl-accepting chemotaxis protein | AVA_RS00305 | Not Available | Positive | 74149 - 76407 | 81293.2 |
| hybrid sensor histidine kinase/response regulator | AVA_RS00310 | Not Available | Positive | 76513 - 79437 | 109413.0 |
| serine/threonine protein kinase | AVA_RS00315 | Not Available | Negative | 79620 - 80324 | 27525.5 |
| pas domain s-box protein | AVA_RS00320 | Not Available | Negative | 80617 - 85761 | 197705.0 |
Pathways
1332 pathways
Health Effects
No health effects information available for this bacterium.
