Akkermansia muciniphila str. EB-AMDK-15

Gram-negativeCocciNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Akkermansiaceae

Genus

Akkermansia

Description

Akkermansia muciniphila str. EB-AMDK-15 is a Gram-negative, anaerobic cocci that typically exists in host-associated environments, thriving optimally at a temperature of 37.0°C. This strain is characterized by its unique cellular arrangement, where cells predominantly form pairs and can also be observed as singles. As a member of the Akkermansia genus, this strain is known to inhabit mucosal surfaces, suggesting a specialized role in the microbiota of its host. Its anaerobic nature indicates an adaptation to environments devoid of oxygen, which is common in the gastrointestinal tract where it can contribute to host health. The ability to persist in such ecological niches may be linked to its metabolic capabilities, particularly in utilizing mucin as a carbon source, thus potentially influencing gut health and homeostasis. The presence of Akkermansia muciniphila, including strain EB-AMDK-15, in the gut microbiome is emerging as a significant aspect of microbial ecology, with implications for gut barrier function and overall metabolic health. Understanding its specific traits and behaviors could provide insights into the complex interactions within the gastrointestinal microbiota and their impact on host physiology.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyAkkermansiaceae
GenusAkkermansia
SpeciesAkkermansia muciniphila
StrainEB-AMDK-15

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Akkermansia muciniphila str. EB-AMDK-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Akkermansia muciniphila strain EB-AMDK-15 chromosome, complete

Gene Summary

Adenine Count

618989 bp

Thymine Count

619239 bp

Guanine Count

768574 bp

Cytosine Count

763296 bp

Genome Length

2770098 bp

Protein-coding Genes

2326 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-coupling factor abc transporter permeaseC1O50_RS02395Not AvailablePositive566409 - 56745235981.2
cobalt ecf transporter t component cbiqC1O50_RS02400Not AvailablePositive567461 - 56827330050.0
energy-coupling factor abc transporter atp-binding proteinC1O50_RS02405Not AvailablePositive568270 - 56904027992.9
atp-dependent dna helicaseC1O50_RS02410Not AvailableNegative569048 - 57103374073.0
hypothetical proteinC1O50_RS02415Not AvailableNegative571053 - 57161920406.4
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseC1O50_RS02420Not AvailableNegative571683 - 57253130804.3
dna topoisomerase iv subunit bC1O50_RS02425Not AvailablePositive572656 - 57449769548.8
isoprenyl transferaseC1O50_RS02430Not AvailablePositive574469 - 57523329135.3
mannose-1-phosphate guanylyltransferaseC1O50_RS02435Not AvailablePositive575266 - 57632439123.7
holliday junction resolvase ruvxC1O50_RS02440Not AvailablePositive576342 - 57674614376.7

Displaying genes 491 – 500 of 2391 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Food allergyCausesPMC11210198
Thinning of the jejunum mucus layerCausesPMC7527075

Displaying health effects 1 – 2 of 2 in total