Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus antarcticus |
| Strain | DSM 15986 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | microbial mats in Antarctic lakes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757509 bp
Thymine Count
1772544 bp
Guanine Count
1208394 bp
Cytosine Count
1182642 bp
Genome Length
5923881 bp
Protein-coding Genes
5063 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C8N25_103103 | Not Available | Negative | 1126357 - 1126668 | 11951.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | C8N25_103104 | Not Available | Negative | 1126658 - 1127152 | 19060.0 |
| outer membrane protein with beta-barrel domain | C8N25_103105 | Not Available | Negative | 1127248 - 1127922 | 24838.7 |
| hypothetical protein | C8N25_103106 | Not Available | Negative | 1128181 - 1128390 | 8089.65 |
| glutamyl-trna synthetase | C8N25_103107 | Not Available | Negative | 1128397 - 1129935 | 57509.6 |
| transcription-repair coupling factor (superfamily ii helicase) | C8N25_103108 | Not Available | Positive | 1130331 - 1133684 | 127014.0 |
| gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530 | C8N25_103109 | Not Available | Positive | 1133862 - 1135088 | 46381.0 |
| putative membrane protein ypha (doxx/surf4 family) | C8N25_103110 | Not Available | Positive | 1135309 - 1135752 | 16836.0 |
| hypothetical protein | C8N25_103111 | Not Available | Negative | 1135971 - 1136573 | 23189.4 |
| n-acetylmuramoyl-l-alanine amidase | C8N25_103112 | Not Available | Positive | 1136778 - 1137767 | 36978.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
